CDS

Accession Number TCMCG017C04372
gbkey CDS
Protein Id OMP09042.1
Location complement(join(28823..29134,29329..29543,29886..30030,30257..30419,30506..30567,30644..30746,30821..30870,30975..31062,31547..32079,32573..33025))
GeneID InterPro:IPR001841
Organism Corchorus olitorius
locus_tag COLO4_05871

Protein

Length 707aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01012495.1
Definition Zinc finger, RING-type [Corchorus olitorius]
Locus_tag COLO4_05871

EGGNOG-MAPPER Annotation

COG_category K
Description E3 ubiquitin-protein ligase ORTHRUS
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10638        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0000792        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005720        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006304        [VIEW IN EMBL-EBI]
GO:0006305        [VIEW IN EMBL-EBI]
GO:0006306        [VIEW IN EMBL-EBI]
GO:0006323        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006333        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008327        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010216        [VIEW IN EMBL-EBI]
GO:0010369        [VIEW IN EMBL-EBI]
GO:0010385        [VIEW IN EMBL-EBI]
GO:0010424        [VIEW IN EMBL-EBI]
GO:0010428        [VIEW IN EMBL-EBI]
GO:0010429        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031055        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031497        [VIEW IN EMBL-EBI]
GO:0031507        [VIEW IN EMBL-EBI]
GO:0031508        [VIEW IN EMBL-EBI]
GO:0031935        [VIEW IN EMBL-EBI]
GO:0031937        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032776        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0034508        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042393        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044728        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051054        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051301        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065004        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0070828        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090308        [VIEW IN EMBL-EBI]
GO:0090309        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098687        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902275        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1905269        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]
GO:2001252        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGCACGTTAGCATACAGCTTCCGTGCGATGGCGACGGCGCGTGTATGCGCTGCAAGTCAACGCCTCCGCCGGAGGAGACTCTTACCTGTGCCATGTGCGCAACTCCTTGGCACGTGCCTTGTTTGGCTTCTCCTATTGAATCCTTGGAATCTACTCTGCGATGGCACTGTCCTGACTGCAGTGGTGATGTTCTTCCCTCAGCCGTGGCAGTCGTTGATGGCAACTCCAGTAAGCTTATGGCGGCTATAAAGGCCATCGAGGCAGATGCATCCTTGACGGAGAAGGAGAAGGCGAGGAAGAAACAAGAGCTGGTAAGTGGAAGAGCGGCGGACGATGGTGATAAAGACAAGAAAGGTAAAGGAAAAGAGGTGGAAAACACGGTTTTGGATGTTCTAGGTGGTAACTTGAACTGTTCATTCTGCATGCAGTTACCTGAGAGGCCTGTTACGACACCATGTGGCCACAACTTTTGCCTTAAATGCTTCCAGAAGTGGATAGGACAGGGAAAACGTACTTGTGCAAAGTGCCGCTCAACAATTCCCACCAAAATGGCAAGCCAGCCTCGTATTAATTCAACCCTTGTATCTGTTATCAGAATGGCAAAGCTATCAAATTTGAATGCCGCTTCTAGCTCTCAGAAGGTTTATCATTTTATGCACAACCAAGATCGACCTGACAAGGCTTTCACTACAGAGCGGGCCAAAAAAGCTGGAAAGGCAAATGCTGCTAGTGGGAAGATATTTGTGACTACACCGCCTGATTTCTTTGGCCCAATTACGGCTGAATATGACCCAACTAGAAACCAGGGTGTGCTTGTTGGTGAATGTTGGCAAGACAGACTTGAATGCCGGCAATGGGGTACTCACCTTCCGCATGTTTCTGGCATTGCTGGTCAGTCAAAGTATGGTGCTCAATCAGTTGCCCTCTCAGGGGGCTACGAGGATGATGAAGATCATGGAGAATGGTTTCTTTACACAGGAAGTGGGGGTAGAGATCTTAGTGGAAACAAGCGAACAAACAAGGCTCAGTCATTTGATCAAAAATTTGATAAGATGAATGAGGCTTTGCGAGTTGGCATTTTTGTTTTATTTTCTGCTTGTCTTTATCCTGGTTGCACCAGGTCACACAAAGAGAAAAGATCTGCTTATGCCCCAGCAGAGAAAGTTGTGAGATATGATGGAGTTTATAGAATTGAAAAATGTTGGCGAAAGGCTGGAAAGCAGGGGTTTAAAGTTTGCCGATATCTGTTTGTGAGATGTGACAATGAGCCTGCCCCATGGACAAGTGATGAGCATGGGGATCGACCTAGGCCTTTACCTCCTATTCCTGAGCTGAAGAAGGCAACTGATGTTACTGAGAGAAAGGAAAATCCATCATGGGACTTTGATGTAAGAGCTGTAGTTGCTATTCATGGATATGTTTGCTTTCATGCTTCTGTTTTTGATACGGAAGAAGAGGGTTGCTGGAAGTGGAAAAAGCCTCCGCCTGCTAGCAGAAAGCAAGTTAATGAAGTTGATCCCAAAGATAGGAAAAGGTCAAGGAAAGCTATGAGGCAAGCTCGTAATATGAGTGTGAAGGACAGACTACTGAAAGAGTTTGGTTGTCTAATCTGTCAGCAAGTTATGAACCTCCCAGTTACAACTCCTTGTGCCCACAACTTTTGCAAGTCTTGTTTTGAAGGTGCATTTGCTGGTAAAAGTGCTGTCACACAGAGGAACAAAGGGGGGCGGACACTTAGAACACGAAAGAATGTCCTGAACTGTCCTTATTGCCCAACTGATGTCTCTGACTTTCTTCAAAACCTTCAGGTGAACCGAGAGCTGATGGATGTCATTGAGTCTCTTAAACAAAAGAGTGAGGAGAATCAGGACTGTCCTACTGAAGAGTCAAGTGAGGATCAGACAGATGATTTGGAGGAAAATTCTGTTGGCAGTGAAACTGAAAACACCGAGACAAAAGATGAGTCAAAACCTCCACCTGAGCGGAGGCCGAAAAGAACTAGCAAGAGGAGAAAGGTGGATGCTGCTTCCCAAGTAGCCGCTGGTGGTAAAAAGGTCTCTCCATCAAGCACCCTCCAAGTCCAATCATCTGATGAAGATGTTGAATGCTTTTCTGGTTGA
Protein:  
MAHVSIQLPCDGDGACMRCKSTPPPEETLTCAMCATPWHVPCLASPIESLESTLRWHCPDCSGDVLPSAVAVVDGNSSKLMAAIKAIEADASLTEKEKARKKQELVSGRAADDGDKDKKGKGKEVENTVLDVLGGNLNCSFCMQLPERPVTTPCGHNFCLKCFQKWIGQGKRTCAKCRSTIPTKMASQPRINSTLVSVIRMAKLSNLNAASSSQKVYHFMHNQDRPDKAFTTERAKKAGKANAASGKIFVTTPPDFFGPITAEYDPTRNQGVLVGECWQDRLECRQWGTHLPHVSGIAGQSKYGAQSVALSGGYEDDEDHGEWFLYTGSGGRDLSGNKRTNKAQSFDQKFDKMNEALRVGIFVLFSACLYPGCTRSHKEKRSAYAPAEKVVRYDGVYRIEKCWRKAGKQGFKVCRYLFVRCDNEPAPWTSDEHGDRPRPLPPIPELKKATDVTERKENPSWDFDVRAVVAIHGYVCFHASVFDTEEEGCWKWKKPPPASRKQVNEVDPKDRKRSRKAMRQARNMSVKDRLLKEFGCLICQQVMNLPVTTPCAHNFCKSCFEGAFAGKSAVTQRNKGGRTLRTRKNVLNCPYCPTDVSDFLQNLQVNRELMDVIESLKQKSEENQDCPTEESSEDQTDDLEENSVGSETENTETKDESKPPPERRPKRTSKRRKVDAASQVAAGGKKVSPSSTLQVQSSDEDVECFSG